YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YG1I_YEAST
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTIKVIRK KDPKKKNLSD PLAKQKLVWK IGHVLTLVFG LLFSITYFYH VLIFFKYRSW  60
   61 KWLFLRVNKN YSFIQSKRWY MKLLSWSPQV MYRLSLIGVF MSESVTMQQN WVGLNPTWND 120
  121 LLSSENFHTL LIACLWFFGG GKSFYKILPY MILSYLHLTK MNYELNANKE EKIPLTPKDR 180
  181 KMLHLLAYSE LLVILALTLD TILFKTGTSG FMLVIYVGIY WLRLNFSPYA QVAVLELLVK 240
  241 FEKYVPKKYR DKWQVIKNFI YMKMKEHEKR TEEVARYA

Type	Start	End	Confidence
Non-Cytoplasmic	1	30	0.63
Transmembrane Helix	31	54	0.87
Cytoplasmic	55	88	0.58
Transmembrane Helix	89	107	0.66
Non-Cytoplasmic	108	126	0.75
Transmembrane Helix	127	145	0.88
Cytoplasmic	146	181	0.84
Transmembrane Helix	182	204	0.65
Non-Cytoplasmic	205	206	0.48
Transmembrane Helix	207	224	0.66
Cytoplasmic	225	278	0.63