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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111606559
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISTRLTRVG ALASKSRLLL GARGMATVAD SPLDKKVEMT NWEKGNHINY KKMAENLDIV  60
   61 RARLNRPLTY AEKILYSHLD DPHGQEIERG KSYLKLRPDR VACQDATAQM AILQFMSAGM 120
  121 PSVATPTTVH CDHLIEAQLG GDKDLARANE INKEVYNFLS SSCAKYNIGF WKPGSGIIHQ 180
  181 ILLENYCFPG GLMIGTDSHT PNGGGLGMAA IGVGGADAVD VMAGLPWELK APKVIGVKLT 240
  241 GELSGWTAPK DIILKVAGIL TVKGGTGAII EYHGPGVDSL SCTGMGTICN MGAEIGATTS 300
  301 VFPFNERMYD YLKATKRQAI GDFARTYSKG LREDEGAEYD QLIEINLSEL EPHINGPFTP 360
  361 DLATPISKFK EAVKANGWPE ELKVGLIGSC TNSSYEDMSR AASIARDALN HGLKAKSLFT 420
  421 VTPGSEQIRA TIERDGQLKT LEEFGGVILA NACGPCIGQW DRKDVKKGEK NSIISSYNRN 480
  481 FTGRNDANPA THAFVTSPDL VVALTVAGTL NFNPLTDTLK GADGKEFKLA PPTGEGLPAR 540
  541 GYDPGRDTYQ APPQDRASIQ VAVSPSSDRL QVLQPFKPWD GKDAKGIPIL IKAQGKTTTD 600
  601 HISMAGPWLK YRGHLDNISN NMLIGAVNAE NGETNNVKNF QTGEYAGVPD TARAYKAKGI 660
  661 KWVVIGDWNY GEGSSREHAA LEPRHLGGLA IITRSFARIH ETNLKKQGML PLTFTDPADY 720
  721 DRIPPTATVD LMCTELAVGK PITLRVHPKD GKPFDVSLSH TFNESQLQWF KDGSALNTMA 780
  781 KQRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle