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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NUP49
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGLNKASST PAGGLFGQAS GASTGNANTG FSFGGTQTGQ NTGPSTGGLF GAKPAGSTGG  60
   61 LGASFGQQQQ QSQTNAFGGS ATTGGGLFGN KPNNTANTGG GLFGANSNSN SGSLFGSNNA 120
  121 QTSRGLFGNN NTNNINNSSS GMNNASAGLF GSKPAGGTSL FGNTSTSSAP AQNQGMFGAK 180
  181 PAGTSLFGNN AGNTTTGGGL FGSKPTGATS LFGSSNNNNN NNNSNNIMSA SGGLFGNQQQ 240
  241 QLQQQPQMQC ALQNLSQLPI TPMTRISELP PQIRQEIEQL DQYIQKQVQI SHHLKADTID 300
  301 HDELIDSIPR DVAYLLKSES ATSQYLKQDL KKISSFKSLI DEDLLDTQTF SVLLQQLLTP 360
  361 GSKISSNDLD KFFQKKIHLY EKKLEDYCRI LSDIETAVNG IDTDLFGAPN NPNSTAITAD 420
  421 LGSSEAENLL QLKTGLAAIV STVIEEFTLF MDIAERIAVL HQKTKTLASL SI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle