YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YGL165C
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTYPVQPWT NFIIVYIYVY VYEWKNLSES RPDCQLAGRT NNRQYMYMYI YIDVQMHYCE  60
   61 CELCEDTCLY SSFNSLMENG MSISFSAVFV VVYALPVSLI LTGSIDILGL CSSGSREAKS 120
  121 RLSMLSALIS PFCRGGFKLG NVVVMSTSDE RPFRPKRTSR SAIPRPLTCA ASSFALLWHD 180
  181 PPFDFRLLFL LV

Type	Start	End	Confidence
Cytoplasmic	1	82	0.53
Transmembrane Helix	83	108	0.76
Non-Cytoplasmic	109	121	0.47
Transmembrane Helix	122	137	0.39
Cytoplasmic	138	160	0.76
Transmembrane Helix	161	179	0.75
Non-Cytoplasmic	180	192	0.83