YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YGL152C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIVSRTVTI TISVKKLITY IELRYGMESS TCPFCQSGTL ISLAAVFFCH SGMEALLSIV  60
   61 CSLAFFHAGT ALSSLLASLP FSFSLSLSSC MPILARISDA DGIVSMPGIP LGDMENNLLS 120
  121 CALPDSIRLF IKLFRDSISF WILFNSCMPS LSETNLSIVF CILTTSSLTI LNSSSIFSLL 180
  181 LVVCTSACFS SAIVSLSSFN VSLSFFLNSA CSASMALRTV SILEN

Type	Start	End	Confidence
Cytoplasmic	1	33	0.81
Transmembrane Helix	34	53	0.65
Non-Cytoplasmic	54	54	0.32
Transmembrane Helix	55	87	0.71
Cytoplasmic	88	140	0.66
Transmembrane Helix	141	171	0.56
Non-Cytoplasmic	172	173	0.32
Transmembrane Helix	174	199	0.78
Cytoplasmic	200	200	0.28
Transmembrane Helix	201	222	0.51
Non-Cytoplasmic	223	225	0.42