YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190338142, gi...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQPKNRLEV PSKMWVTTVV VIVIVLQVAS TTGLFIYLNM SVAQARTQGM VEELRCLGLL  60
   61 NAMEKEQDVP DDLVQLFGEP CIKLAEGLKA YISKVTENII SKHTFEERVS FPPRTKLLTT 120
  121 GSPRPSAHLT LRDSGLQGTT SLTPQMDLHQ SCRHPVRSWG NQSFGSHLHN MTVSNGRLRV 180
  181 PRAGRYYLYA QVYFRYLTLS VDDYHSGSVS HQVVQCVYKK TAYARPIQLL KGVGTKCWSP 240
  241 DSENALHSIY QGGLFELRAG DEIFISVSSP TAVYAEDSSS YFGAFLFDL

Type	Start	End	Confidence
Cytoplasmic	1	14	0.84
Transmembrane Helix	15	38	0.87
Non-Cytoplasmic	39	289	0.93