YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ORFP:8545
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAWLFILAV VVNCINLFGQ VHFTILYADL EADYINPIEL CSKVNKLITP EAALHGALSL  60
   61 LFLLNGYWFV FLLNLPVLAY NLNKIYNKVQ LLDATEIFRT LGKHKRESFL KLGFHLLMFF 120
  121 FYLYRMIMAL IAESGDDF

Type	Start	End	Confidence
Cytoplasmic	1	4	0.86
Transmembrane Helix	5	26	0.87
Non-Cytoplasmic	27	56	0.88
Transmembrane Helix	57	78	0.82
Cytoplasmic	79	108	0.91
Transmembrane Helix	109	132	0.84
Non-Cytoplasmic	133	138	0.92