YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PRM8
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTPSENTNA KSDSLDEPGA YLIEENVALP KDIFHSYLSY WIYEAAHCTP VMLLSLVIGV  60
   61 LISIIILFHD NENCVGVSVG FLLIFSGILV IVLILRFGPQ ISDEDFKCKL LMEIITRKPT 120
  121 VKGKEWRTIT YKMNQYLFDN DLWNTPYYFY RDEDCHRYFL SLIKGRTFKK QKESSASNVK 180
  181 DAQSNDETAG TPNEAAESSS FSAGPNFIKL LTKAAEIEQQ FQKEYWRQEY PGVDEFF

Type	Start	End	Confidence
Cytoplasmic	1	45	0.77
Transmembrane Helix	46	68	0.91
Non-Cytoplasmic	69	74	0.68
Transmembrane Helix	75	97	0.90
Cytoplasmic	98	237	0.78