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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OCH1
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKLSHLIA TRKSKTIVVT VLLIYSLLTF HLSNKRLLSQ FYPSKDDFKQ TLLPTTSHSQ  60
   61 DINLKKQITV NKKKNQLHNL RDQLSFAFPY DSQAPIPQRV WQTWKVGADD KNFPSSFRTY 120
  121 QKTWSGSYSP DYQYSLISDD SIIPFLENLY APVPIVIQAF KLMPGNILKA DFLRYLLLFA 180
  181 RGGIYSDMDT MLLKPIDSWP SQNKSWLNNI IDLNKPIPYK NSKPSLLSSD EISHQPGLVI 240
  241 GIEADPDRDD WSEWYARRIQ FCQWTIQAKP GHPILRELIL NITATTLASV QNPGVPVSEM 300
  301 IDPRFEEDYN VNYRHKRRHD ETYKHSELKN NKNVDGSDIM NWTGPGIFSD IIFEYMNNVL 360
  361 RYNSDILLIN PNLNKNDEEG SESATTPAKD VDNDTLSKST RKFYKKISES LQSSNSMPWE 420
  421 FFSFLKEPVI VDDVMVLPIT SFSPDVGQMG AQSSDDKMAF VKHMFSGSWK EDADKNAGHK 480
  481 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle