YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89212930
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMIMFMITM SLTLSIILTA LNYWLAQTNP DSEKLSPYEC GFDPLGSARL PFSIRFFLVA  60
   61 ILFLLFDLEI ALLLPIPWAT QLQNPTTTLT WASTLIFLLT LGLIYEWTQG GLEWAE

Type	Start	End	Confidence
Cytoplasmic	1	5	0.52
Transmembrane Helix	6	26	0.92
Non-Cytoplasmic	27	53	0.52
Transmembrane Helix	54	76	0.88
Cytoplasmic	77	86	0.47
Transmembrane Helix	87	108	0.89
Non-Cytoplasmic	109	116	0.54