YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GET1
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHWAAAVAIF FIVVTKFLQY TNKYHEKWIS KFAPGNELSK KYLAKVKERH ELKEFNNSIS  60
   61 AQDNYAKWTK NNRKLDSLDK EINNLKDEIQ SENKAFQAHL HKLRLLALTV PFFVFKIMYG 120
  121 KTPVYKLSSS TSTLFPTFVS GVWSQGWLYV LLHPLRTISQ KWHIMEGKFG ASKFDDMALQ 180
  181 SVSLGIWVWA LMNVINGVEF IVKQLFLTPK MEAPASVETQ EEKALDAVDD AIILD

Type	Start	End	Confidence
Cytoplasmic	1	102	0.74
Transmembrane Helix	103	120	0.62
Non-Cytoplasmic	121	132	0.65
Transmembrane Helix	133	155	0.70
Cytoplasmic	156	176	0.58
Transmembrane Helix	177	198	0.53
Non-Cytoplasmic	199	235	0.51