YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ERP6
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.86
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSHYIFLAF VLLPFRVSAF YFYGYGGDRK CFLKELSKDT LLKGSYNLEV YDDKLADYAL  60
   61 PSYNDYGIVI DVEEVFDNNH RVVHQQGSPS GDFSFLALES GEYKICLQSR VNNWVGKTKT 120
  121 KLEIEFEVGF EAMLDMQRKE TLESLHGKVS ILNSKIVDIR REQQLMRERE ESFRDISESV 180
  181 NSRAMWWTVT QVTLLIIICV WQMKSLRSFF VKQKVL

Type	Start	End	Confidence
Signal Peptide	1	19	0.97
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	183	0.98
Transmembrane Helix	184	203	0.84
Cytoplasmic	204	216	0.81