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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RMD8
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYKANQPSP GEMPKRSPSI LVTDARTSKN RMSAPFAGHA AGSRKNMENA GVTKSQGVRS  60
   61 SAIGPSPLQS FTHPRRRSSG RFSDISIDNI LSDNSDIPSA RREERLSSSS SDRPRQYERL 120
  121 SSRRKMINPL PPRTSKTSQK LVLIPEDDNL NHFQTLPTNA LDRQRPKVGS MKSNSFDRLP 180
  181 RYSKEKSMAR ITAYNVADGF NLNQLYKFLQ ETHEVSPRLY DECLYVAYTL PLLPGKGGFR 240
  241 IKSNLSKKTM GGKTLIDNLI DTSEQRDHHY EYYSGVETVE DANNNYELET SGNNNNANQD 300
  301 TTTVPDHLPN PVGQQDSFNP MEPQFFAEET PLEIEKRERT ERINMLKKEE NDSDASCGND 360
  361 NNNKNNDKSK LYAVEGNDQY VQSSRSPASP SSISTPSPPS SSQNDFDRVY KMHRDNDHEG 420
  421 NDRHAEIFIF HYGVIVFWNF TEIQEKNILG DITFADYKNL MIRPLDEQDI ETEQFHFEYD 480
  481 RDTERPRIFN DIVTLRSGDH IIELTLSHAI AQSSKLSRFE SRISPILISV TKLPKRLALY 540
  541 GTLGLKREQL LKKSGKLFKL RVDVNLSSTI LDTPEFFWSF EPSLHPLYVA MREYLEIDQR 600
  601 VQVLNDRCKV FLEFFDICVD SVAERNMARV TWWFILVILF GVIFSLTEIF VRYVIIHRHT 660
  661 ST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle