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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|213627470, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSAGRVTLF FLLITLITQD CFSSKGEDRL FRRLFRRYNQ FIRPVENVSD PVTVEFEVSI  60
   61 SQLVKVDEVN QIMETNLWLR HIWNDYKLKW SPAEFDGIEF IRVPSNKIWR PDIVLYNNAV 120
  121 GDFLVEDKTK ALLKFDGTIT WVPPAIFKSS CPMDITYFPF DYQNCSMKFG SWTYDKAKID 180
  181 LVLIGSKVNL KDFWESGEWE IIDAPGYKHD IKYNCCEEIY PDITYSFYIR RLPLFYTINL 240
  241 IIPCLLISFL TVLVFYLPSD CGEKVTLCIS VLLSLTVFLL VITETIPSTS LVIPLIGEYL 300
  301 LFTMIFVTLS IVITVFVLNV HYRTPMTHTM PSWVHTVFLR ALPRIMLMRR PLDLSESSGK 360
  361 GGLETGGSSG TGAGRGGEGK KRKNSGSQQG AMNSLEFGEG KAALEGKKGG CPCHPLKEAT 420
  421 EGDCGKVSRQ LSPQAINTVV AFSVVSPEIK QAIESVKYIA ENMRSRNKAK EVEDDWKYVA 480
  481 MVIDRIFLWV FVLVCVLGTL GLFLQPLIGF LS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle