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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LSB3
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGINNPIPRS LKSETNFVKP NQVFGADQVI PPDVLKRAKG LAIITILKAG FLFSGRAGSG  60
   61 VIVARLKDGT WSAPSAIAMA GAGAGGMVGI ELTDFVFILN TQDAVKSFSE FGTITLGGNV 120
  121 SVSAGPLGRS AEAAASASAG GVAAVFAYSK SKGLFAGVSV EGSAIIERRE ANRKFYGDNC 180
  181 TAKMILSGRI RPPPAVDPLF RVLESRAFNY RPSNGGRGSF DDDEDDYYDD DDYYNDIPSS 240
  241 FSSTDASSTR PNTRSTRRRA QSGSRYTFDD DDDDDDYGTG YSRNSRLAPT NSGGSGGKLD 300
  301 DPSGASSYYA SHRRSGTAQS RARSSRNRWA DDEYDDYDDD YESGYRRGNG RDRTKDREVD 360
  361 DLSNRFSKSR ISSASTPQTS QGRFTAPTSP STSSPKAVAL YSFAGEESGD LPFRKGDVIT 420
  421 ILKKSDSQND WWTGRVNGRE GIFPANYVEL V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle