YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DCV1_YEAST
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNYKLILLF SSFLQLISFS GFMICCLTSP IIRNWGLAQA AGVSYGTFGY CKTLNSFSCS  60
   61 RVRLIYNTSK EILPGPSLER WWLSPKARHT IGGLLISIPV ATCLTFISFA LPLVIIFLFQ 120
  121 TGGTNVSLIT SNAILHILTL LSTIFACTVI LLLCMHRDPV TISSLYDLVW LANCSLFPLL 180
  181 VIGVHFLSFR FDTSAQSDRK HS

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.45
Transmembrane Helix	7	32	0.82
Cytoplasmic	33	90	0.72
Transmembrane Helix	91	116	0.89
Non-Cytoplasmic	117	132	0.80
Transmembrane Helix	133	155	0.93
Cytoplasmic	156	165	0.83
Transmembrane Helix	166	187	0.91
Non-Cytoplasmic	188	202	0.86