YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	STE2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDAAPSLSN LFYDPTYNPG QSTINYTSIY GNGSTITFDE LQGLVNSTVT QAIMFGVRCG  60
   61 AAALTLIVMW MTSRSRKTPI FIINQVSLFL IILHSALYFK YLLSNYSSVT YALTGFPQFI 120
  121 SRGDVHVYGA TNIIQVLLVA SIETSLVFQI KVIFTGDNFK RIGLMLTSIS FTLGIATVTM 180
  181 YFVSAVKGMI VTYNDVSATQ DKYFNASTIL LASSINFMSF VLVVKLILAI RSRRFLGLKQ 240
  241 FDSFHILLIM SCQSLLVPSI IFILAYSLEP NQGTDVLTTV ATLLAVLSLP LSSMWATAAN 300
  301 NASKTNTITS DFTTSTDRFY PGTLSSFQTD SINNDAKSSL RSRLYDLYPR RKETTSDKHS 360
  361 ERTFVSETAD DIEKNQFYQL PTPTSSKNTR IGPFADASYK EGEVEPVDMY TPDTAADEEA 420
  421 RKFWTEDNNN L

Type	Start	End	Confidence
Non-Cytoplasmic	1	50	0.87
Transmembrane Helix	51	71	0.86
Cytoplasmic	72	79	0.87
Transmembrane Helix	80	99	0.93
Non-Cytoplasmic	100	127	0.88
Transmembrane Helix	128	150	0.83
Cytoplasmic	151	161	0.82
Transmembrane Helix	162	185	0.88
Non-Cytoplasmic	186	205	0.91
Transmembrane Helix	206	228	0.91
Cytoplasmic	229	243	0.92
Transmembrane Helix	244	266	0.93
Non-Cytoplasmic	267	275	0.84
Transmembrane Helix	276	298	0.86
Cytoplasmic	299	431	0.96