YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	WWM1
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQSKSNPPQ VPSGWKAVFD DEYQTWYYVD LSTNSSQWEP PRGTTWPRPK GPPPGVNNEK  60
   61 SSRQQADQAP PPYSSQSTPQ VQAGAQAQQP RYYQPQQPQY PQYPQQQRYY PQQAPMPAAA 120
  121 PQQAYYGTAP STSKGSGHGG AMMGGLLGVG AGLLGGAMLE HAFDDHNYDG PDTVVVENNY 180
  181 YGDDAGGSDG GFDDAGGFDG GFDDGFDGSD F

Type	Start	End	Confidence
Cytoplasmic	1	138	0.62
Transmembrane Helix	139	159	0.65
Non-Cytoplasmic	160	211	0.90