YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FMP10
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKRIAIAQI RTYTNGVVFK TASKPKRRWI PWTIFGGSFL GGWYLTQHMT FTDLLAYWRY  60
   61 DALPKNADEV VKYHADLNRR LNGLPIVKQL ENAGFVQVIA NEEENLLVSR ALNTPGGVAI 120
  121 PPRVYYNPSR RETVGLYHLG MKLTGYPFLI HGGILATVIE DLMKEAIRLE KGTKNINQET 180
  181 KNLSISYKFP TLANQFVVVR TTDLQQYGNK TKLKAELMDQ SGNRTLVKAN ATFSSEQGNP 240
  241 KEEK

Type	Start	End	Confidence
Cytoplasmic	1	28	0.93
Transmembrane Helix	29	47	0.90
Non-Cytoplasmic	48	244	0.73