YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GET2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWICTNELF HVCSISNVAL GNMSELTEAE KRRLLRERRQ KKFSNGGASS RLNKITGQAS  60
   61 SHLNAESPLD APSAAKTTPP ASVHSATPDI KEDSNVAPQL DLLKQLAAMQ GQGTGKSTPQ 120
  121 DSSTPDLLSL LSSMNTGMPS AEGTPSFGQA APAAPINQAA LDYHDYLLNR LKAWTILVKW 180
  181 VFFLLPYLYL ITRPNSSVWP AYAFTQSAWF APLRNPSNFT RIFATFEFLS ISIYYQLLKN 240
  241 VEHKSKIKNL QDTNKLVKLV SLVPEGVIPV ANLKGKLITL LQYWDLLSML ITDISFVLIV 300
  301 LGLLTYL

Type	Start	End	Confidence
Cytoplasmic	1	175	0.93
Transmembrane Helix	176	192	0.86
Non-Cytoplasmic	193	218	0.82
Transmembrane Helix	219	238	0.82
Cytoplasmic	239	282	0.86
Transmembrane Helix	283	305	0.89
Non-Cytoplasmic	306	307	0.72