YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190405606
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSLQDVITT TKTTLAAMPK GYLPKWLLFI SIVSVFNSIQ TYVSGLELTR KVYERKPTET  60
   61 THLSARTFGT WTFISCVIRF YGAMYLNEPH IFELVFMSYM VALFHFGSEL LIFRTCKLGK 120
  121 GFMGPLVVST TSLVWMYKQR EYYTGVAW

Type	Start	End	Confidence
Non-Cytoplasmic	1	25	0.72
Transmembrane Helix	26	46	0.80
Cytoplasmic	47	62	0.84
Transmembrane Helix	63	83	0.83
Non-Cytoplasmic	84	90	0.77
Transmembrane Helix	91	113	0.84
Cytoplasmic	114	120	0.73
Transmembrane Helix	121	137	0.58
Non-Cytoplasmic	138	148	0.53