YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIR1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYTKIALFA AIAALASAQT QDQINELNVI LNDVKSHLQE YISLASDSSS GFSLSSMPAG  60
   61 VLDIGMALAS ATDDSYTTLY SEVDFAGVSK MLTMVPWYSS RLEPALKSLN GDASSSAAPS 120
  121 SSAAPTSSAA PSSSAAPTSS AASSSSEAKS SSAAPSSSEA KSSSAAPSSS EAKSSSAAPS 180
  181 SSEAKSSSAA PSSTEAKITS AAPSSTGAKT SAISQITDGQ IQATKAVSEQ TENGAAKAFV 240
  241 GMGAGVVAAA AMLL

Type	Start	End	Confidence
Signal Peptide	1	20	0.97
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	254	0.99