YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HHY1
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSFLLFSP FLPPCFSSIS ICLSVLSTVS FFFAFTIPHY VLRCGSVDEW HIHSSAEDFR  60
   61 TQRCVCAVKL SASLLGCLLA CASWSLLLEV SRIKWHVGTA YS

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.46
Transmembrane Helix	15	37	0.73
Cytoplasmic	38	64	0.48
Transmembrane Helix	65	88	0.69
Non-Cytoplasmic	89	102	0.63