YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PAD1
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLFPRRTNI AFFKTTGIFA NFPLLGRTIT TSPSFLTHKL SKEVTRASTS PPRPKRIVVA  60
   61 ITGATGVALG IRLLQVLKEL SVETHLVISK WGAATMKYET DWEPHDVAAL ATKTYSVRDV 120
  121 SACISSGSFQ HDGMIVVPCS MKSLAAIRIG FTEDLITRAA DVSIKENRKL LLVTRETPLS 180
  181 SIHLENMLSL CRAGVIIFPP VPAFYTRPKS LHDLLEQSVG RILDCFGIHA DTFPRWEGIK 240
  241 SK

Type	Start	End	Confidence
Cytoplasmic	1	9	0.67
Transmembrane Helix	10	30	0.56
Non-Cytoplasmic	31	242	0.77