YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDR526C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPCLLPPTQV PEAPSISANN GVLFSSFALL FMFFNSLAIS LGSKELYRSS RSCTICSSLI  60
   61 PCRTLIFSLW IDFASDSGAS VLVCCFSASL PLVFFFWALF SLSLSFQDDI FLGLYNSGNP 120
  121 VPQLLVLRVP LSLLSTESDV SFSTISPSKS ITMVAE

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.80
Transmembrane Helix	21	41	0.91
Cytoplasmic	42	51	0.75
Transmembrane Helix	52	71	0.74
Non-Cytoplasmic	72	77	0.65
Transmembrane Helix	78	100	0.91
Cytoplasmic	101	156	0.73