YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	THI74
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	10	0.86
Transmembrane Helix	11	31	0.90
Non-Cytoplasmic	32	43	0.86
Transmembrane Helix	44	66	0.87
Cytoplasmic	67	119	0.97
Transmembrane Helix	120	139	0.92
Non-Cytoplasmic	140	144	0.70
Transmembrane Helix	145	167	0.87
Cytoplasmic	168	174	0.85
Transmembrane Helix	175	193	0.94
Non-Cytoplasmic	194	200	0.85
Transmembrane Helix	201	225	0.85
Cytoplasmic	226	239	0.91
Transmembrane Helix	240	260	0.93
Non-Cytoplasmic	261	273	0.79
Transmembrane Helix	274	294	0.91
Cytoplasmic	295	299	0.76
Transmembrane Helix	300	320	0.91
Non-Cytoplasmic	321	328	0.75
Transmembrane Helix	329	347	0.97
Cytoplasmic	348	370	0.96

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRVGIDVDH MIGVLLLAVV VVFWVGASCL TNELLETNAY NKPFFLTYLN ISSFALYLTP  60
   61 DLWRIIQSRR KSLQERTERT LPIHTQESFS EFLPLLSSTP STSSNLSSIA DTKVKDTMRL 120
  121 SLLFCVLWFV ANLAANAALS YTTVASSTIL SSTSSFFTLF LATSLGIETF STKKLLGLFV 180
  181 SLFGIILIVM QSSKQQDSVS ASSFLVGNTL ALLGSLGYSV YTTLLKYEIS SKGLRLDIQM 240
  241 FLGYVGIFTF LLFWPILIIL DITHMETFEL PSNFHISFLV MLNCIIIFVS DYFWCKALIL 300
  301 TSPLVVTVAL TFTIPLAMFA DFVWREAFFT PWYIIGVIFI FVSFFLVNHR GESAVEKDCA 360
  361 AVEKGPILDA