YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDR401W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYIYSIIFS LNFNFKLRGQ RGPAGVNFSS HSGSRLHRNC FNISAKEILI SVRASFSPRH  60
   61 ALRPPWNPVT AHLFFAILQF FLMVSISEPH LSGLKSSAVV PQVLGSCEVP KLLYPTYTPL 120
  121 GITISAPNLH VLVVHLLIIV LKGGYILTTS KRKAFNKGKS AKPFGSVMPF TSFLSFSCHS 180
  181 FEYLARR

Type	Start	End	Confidence
Cytoplasmic	1	67	0.96
Transmembrane Helix	68	87	0.89
Non-Cytoplasmic	88	125	0.90
Transmembrane Helix	126	146	0.87
Cytoplasmic	147	163	0.86
Transmembrane Helix	164	183	0.63
Non-Cytoplasmic	184	187	0.55