YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDR352W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCSNGIWPT VSNLCGSLSF FTSVISLFPQ IIETYRDKSV DGLSPYFLLA WLCGDITSLI  60
   61 GAKLTGQLLF QILLAIYFLL NDSFVCGQYY YYGVLHENKL ATVGHEPKPL LPELVENGEL 120
  121 LREEEDMIQG GSSAESPRSS RRRSAITAAL AIAHTISTAS AYPLNVGSTQ SQVGPPGDGK 180
  181 NSQLGTILSW IGASFYVGAR IPQLIKNYNR KSTDGLSPFL FATTLLCNIT YNLSIFTSCR 240
  241 FLDNQNKREF IVNELPFIFG SAGTIAFDLI YFYQYYILYA TDMQLRELER ELYSPEEDSA 300
  301 AQLVTERTSL LSGETQT

Type	Start	End	Confidence
Cytoplasmic	1	6	0.55
Transmembrane Helix	7	32	0.74
Non-Cytoplasmic	33	42	0.47
Transmembrane Helix	43	66	0.70
Cytoplasmic	67	144	0.80
Transmembrane Helix	145	164	0.91
Non-Cytoplasmic	165	183	0.86
Transmembrane Helix	184	204	0.77
Cytoplasmic	205	215	0.81
Transmembrane Helix	216	236	0.76
Non-Cytoplasmic	237	254	0.68
Transmembrane Helix	255	277	0.73
Cytoplasmic	278	317	0.67