YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDR307W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDLRLQGPY RKYIPYNIFQ QCGIGHLKTL DYIFAFLIVI TNFTLIWKSH SSSFWNRPWD  60
   61 NNSEQELSQL IQFYLDKAFY IHELPPFTIQ FYSIIRRLKI AENLRYVSLF LNSSTLGFLF 120
  121 LITRRINCSR LISATGLLIL SNWETFRNEG TIISFDSLEW CLFSVVIYSF ISISIAKLGT 180
  181 TNWFANVITL SISLGLAISS KFIGIVTWAF VILSFVRQFD RLISDVKVTT IQIIKFVILC 240
  241 LLFVLIIPGS IFIISYSNLL SNFKTDTPQF SKYMSTYFKS YLRGPQVQPS RLYYGSTITL 300
  301 RHLDSMVGYL ASHDISYPSD VDEQLVALSF EEFAADNEWL IEHPTLNLSF SEVYHADQLI 360
  361 PVEFGQSIKL RHKSTGKLLR ASTAKPPISE QDYDFQISCT KDSNYEGGMD ERWDVLLIKD 420
  421 EINNDKKDNA DDKYIKPLQS EIRFYNNGQR CGLLGHDLRL PEWGRFEQEV LCMEYPVIPR 480
  481 TTFLIDSVQL PVDFQVPMIE YYIGKISSSA EFNHTLSWSQ FLYLFKEYIF KQYKYNYYIK 540
  541 YGKNKVTFED AFAVEKWPIT LDTDSPVWFN FAWYGSLLSM IIFMCVQCKR MISWNPWTTA 600
  601 EPSFSIKWEV YNEFGWECIV GWFLHFYIFT MSPHFNLGKK LYFQSFFFSV LCLLESLDCL 660
  661 AK

Type	Start	End	Confidence
Cytoplasmic	1	28	0.56
Transmembrane Helix	29	50	0.76
Non-Cytoplasmic	51	103	0.44
Transmembrane Helix	104	123	0.70
Cytoplasmic	124	159	0.56
Transmembrane Helix	160	179	0.88
Non-Cytoplasmic	180	191	0.74
Transmembrane Helix	192	216	0.85
Cytoplasmic	217	232	0.92
Transmembrane Helix	233	254	0.93
Non-Cytoplasmic	255	567	0.98
Transmembrane Helix	568	588	0.86
Cytoplasmic	589	609	0.85
Transmembrane Helix	610	629	0.73
Non-Cytoplasmic	630	640	0.65
Transmembrane Helix	641	661	0.56
Cytoplasmic	662	662	0.70