YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|151942270
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNRVFTRSF ASSLRAAASK AAAPPPVRLF GVEGTYATAL YQAAAKNSSI DAAFQSLQKV  60
   61 ESTVKKNPKL GHLLLNPALS LKDRNSVIDA IVETHKNLDG YVVNLLKVLS ENNRLGCFEK 120
  121 IASDFGVLND AHNGLLKGTV TSAEPLDPKS FKRIEKALSA SKLVGQGKSL KLENVVKPEI 180
  181 KGGLIVELGD KTVDLSISTK IQKLNKVLED SI

Type	Start	End	Confidence
Signal Peptide	1	21	0.85
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	212	0.99