YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SUR2
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVTSNATAA GSFPLAFGLK TSFGFMHYAK APAINLRPKE SLLPEMSDGV LALVAPVVAY  60
   61 WALSGIFHVI DTFHLAEKYR IHPSEEVAKR NKASRMHVFL EVILQHIIQT IVGLIFMHFE 120
  121 PIYMTGFEEN AMWKLRADLP RIIPDAAIYY GYMYGMSALK IFAGFLFVDT WQYFLHRLMH 180
  181 MNKTLYKWFH SVHHELYVPY AYGALFNNPV EGFLLDTLGT GIAMTLTHLT HREQIILFTF 240
  241 ATMKTVDDHC GYALPLDPFQ WLFPNNAVYH DIHHQQFGIK TNFAQPFFTF WDNLFQTNFK 300
  301 GFEEYQKKQR RVTIDKYKEF LQERELEKKE KLKNFKAMNA AENEVKKEK

Type	Start	End	Confidence
Cytoplasmic	1	7	0.57
Transmembrane Helix	8	29	0.65
Non-Cytoplasmic	30	49	0.61
Transmembrane Helix	50	70	0.83
Cytoplasmic	71	97	0.63
Transmembrane Helix	98	119	0.83
Non-Cytoplasmic	120	149	0.69
Transmembrane Helix	150	175	0.77
Cytoplasmic	176	349	0.76