YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|151942257
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRVSFIKTP FNIGAKWRLE DVFLLIIMIL LNYPVYYQQP FERQFYINDL TISHPYATTE  60
   61 RVNNNMLFVY SFVVPSLTIL IIGSILADRR HLIFILYTSL LGLSLAWFST SFFTNFIKNW 120
  121 IGRLRPDFLD RCQPVEGLPL DTLFTAKDVC TTKNHERLLD GFRTTPSGHS SESFAGLGYL 180
  181 YFWLCGQLLT ESPLMPLWRK MVAFLPLLGA ALIALSRTQD YRHHFVDVIL GSMLGYIMAH 240
  241 FFYRRIFPPI DDPLPFKPLM DDSDVTLEEA VTHQRIPDEE LHPLSDEGM

Type	Start	End	Confidence
Cytoplasmic	1	16	0.96
Transmembrane Helix	17	37	0.84
Non-Cytoplasmic	38	65	0.91
Transmembrane Helix	66	86	0.94
Cytoplasmic	87	92	0.82
Transmembrane Helix	93	114	0.91
Non-Cytoplasmic	115	168	0.91
Transmembrane Helix	169	190	0.69
Cytoplasmic	191	196	0.74
Transmembrane Helix	197	216	0.88
Non-Cytoplasmic	217	222	0.68
Transmembrane Helix	223	243	0.89
Cytoplasmic	244	289	0.80