YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BSC2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFFPKLRKL IGSTVIDHDT KNSSGKEEIM SNSRLALVII NHAFDKVLSL TWHCGILSEI  60
   61 RSGLMLMFGI FQLMCSLGVI VLLLPIIILD AIDLFLYMCR LLDYGCKLFH YNRSSLPVAD 120
  121 GKEKTSGPIS GKEEIVIDEE IINMLNESSE SLINHTTAGL EYDISSGSVN KSRRLNSTST 180
  181 VTFVKQNKLV NERREDAYYE EEDDDFLSNP NYDKISLIEK SFTSRFEVAC EQKAA

Type	Start	End	Confidence
Cytoplasmic	1	65	0.79
Transmembrane Helix	66	89	0.87
Non-Cytoplasmic	90	235	0.68