YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190404790
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFNLPVSVL LYFSLIWAME PSFVRGKNVV NLITFKDSNG KLHKRLAPEE IPPRLHNSQV  60
   61 NSYPLGYKGM RDFSRPAVNL DDILGTQQRK QQEFLAELSP LSLESKLSLV NEVQIFASYV 120
  121 RNDVETYNKV SDPNEDLIII APTNRAVSQL TLKPWQFPNN IDKLESDGAT EKELDTAIQE 180
  181 NISKFVRSHI VVYNDDKNSY KKVSPGCTLL QSIDFTESKK SDSETGGDIL LKKEGEVYYV 240
  241 ASSRDEKFHA VESIENGSNG VILMVDFTLV GP

Type	Start	End	Confidence
Signal Peptide	1	26	0.84
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	272	0.99