YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COX20
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWWPWSNQT EDQKQQQQPQ GKADGDRVLT NYSRGQKILL EDTPPKFADD LSNSQLAKKQ  60
   61 ERATLKEAWD SIRWSDFSLQ KLTSIPCFRD AGMLGFSSMF LMGSIIFIYH KSPTKATNWA 120
  121 MSSLILGSIV GWEQCRLKRQ KSFQIAQLAK ETVAKKEKPM LHNVPHDPSL PGQWEAAKNE 180
  181 KQSQFEQSNQ NLSQASSEKK WYKFW

Type	Start	End	Confidence
Cytoplasmic	1	90	0.91
Transmembrane Helix	91	109	0.94
Non-Cytoplasmic	110	115	0.82
Transmembrane Helix	116	135	0.82
Cytoplasmic	136	205	0.89