YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190404867
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLPRSMKFM TGRRIFHTAT VRAFQSTAKK SLTIPFLPVL PQKPGGVRGT PNDAYVPPPE  60
   61 NKLEGSYHWY MEKIFALSVV PLATTAMLTT GPLSTAADSF FSVMLLGYCY MEFNSCITDY 120
  121 ISERVYGVWH KYAMYMLGLG SAVSLFGIYK LETENDGVVG LVKSLWDSSE KDNSQKIEAK 180
  181 K

Type	Start	End	Confidence
Cytoplasmic	1	73	0.81
Transmembrane Helix	74	96	0.72
Non-Cytoplasmic	97	131	0.61
Transmembrane Helix	132	149	0.77
Cytoplasmic	150	181	0.52