YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VPS61
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRFCAHAYL LLKYEKYHNQ NQQLKKLWAS FRCLFRLAAF ALPRRYQSFF EAELILKNST  60
   61 LETRLTLYRR LRSRLRLKNK NYTRSSSIMF NIQTTFPPHG EMKTFIVLRE VDLLLLSLEF 120
  121 MNVSLARADL LVRNLHYFAI HSTLVMLHQY EYIYLMLTSG FCRYLGVCFF MIIQKYVTPG 180
  181 VMLGRWKVTA

Type	Start	End	Confidence
Cytoplasmic	1	151	0.66
Transmembrane Helix	152	173	0.74
Non-Cytoplasmic	174	190	0.43