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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111307884, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSAHAKTVS EVLRHFEVNE NCGLSSEQVR RSREKYGLNE LPAEEGKSLW ELVLEQFEDL  60
   61 LVRILLLAAF VSFILAWFEE GEETTTAFVE PIVIIMILVI NAFVGVWQER NAESAIEALK 120
  121 EYEPEMGKVI RGDRSGVQRI RARDIVPGDI VEVAVGDKVP ADIRITEIRS TTLRVDQSIL 180
  181 TGESVSVIKH TDPIPDPRAV NQDKKNMLFS GTNIAAGKAV GIVIATGIYT EIGKIRNQMV 240
  241 ATEPEKTPLQ QKLDEFGQQL SKVISLICVA VWVINIGHFN DPVHGGSWFR GAIYYFKIAV 300
  301 ALAVAAIPEG LPAVITTCLA LGTRRMAKKN AIVRSLPSVE TLGCTSVICS DKTGTLTTNQ 360
  361 MSVSRMFVIE KIEGVNCSFH EFSITGSTYA PVGQVLKDEQ PVNCGQYDGL VELATICALC 420
  421 NDSSLDFNES KGVYEKVGEA TETALTCLVE KMNVFNTDLS TLSKVERANA CNSVIKKLMK 480
  481 KECTLEFSRD RKSMSVYCNS VAPNSGQSAS KMFVKGAPES VIERCNYVRV GSTKLPLTPS 540
  541 AREKIMSKIR DWGTGMDTLR CLALATRDVP PKLEDMQLDD STKFINYETN LTFVGCVGML 600
  601 DPPRKEVSIS IELCKRAGIK VIMITGDNKG TAVAICRKIG IFSDYEDITD KAYTGREFDD 660
  661 LPPERQREAC RSARCFARVE PAHKSKIVEY LQSYSEITAM TGDGVNDAPA LKKAEIGIAM 720
  721 GSGTAVAKSA AEMVLADDNF SSIVSAVEEG RAIYNNMKQF IRYLISSNVG EVVCIFLTAI 780
  781 LGLPEALIPV QLLWVNLVTD GLPATALGFN PPDLDIMEKL PRNPREPLIS GWLFFRYLAI 840
  841 GVYVGLATVG AATWWFLYDE DGPQVTFYQL RHFMKCTSDN PLFSGIDCDV FESRYPTTMA 900
  901 LSVLVTIEMC NALNSLSENQ SLLRMPPWLN IWLLGAIIMS MALHFLILYI KPMPLVFQVI 960
  961 PLNWSQWVVV LKISLPVILL DEGLKYISRH HLDGLLKTVE QSWNGTAQMK PHRSHDQTGR1020
 1021 NRFQQHTDNN ISK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle