YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TVP15
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVIPPKFFK IANISIGCID IIAALSQLTY IFTNLNVFLL AVYGLALSVP IVYLEFKVPS  60
   61 NLYRYASFYF SFLGRGLSYI LLSLIISFGG IYNILAGMFT FILGVAFIVF HFSQFVEEPA 120
  121 NFRAPGSSLS IGDDDIDDDD DMI

Type	Start	End	Confidence
Cytoplasmic	1	8	0.91
Transmembrane Helix	9	31	0.84
Non-Cytoplasmic	32	36	0.72
Transmembrane Helix	37	56	0.91
Cytoplasmic	57	64	0.83
Transmembrane Helix	65	88	0.82
Non-Cytoplasmic	89	93	0.62
Transmembrane Helix	94	115	0.88
Cytoplasmic	116	143	0.87