YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDR090C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISEKAATAL ATIATVCWCV QLIPQIIYNW KKKDCTGLPP LMMFLWVVSG IPFAIYFCVS  60
   61 KGNVILQVQP HLFMFFCSIS FVQSCYYPPI SMARSKIVMI VAAIIAADVG MEVGFILWLR 120
  121 PLYEKGVKWP DLIFGISASV LLAVGLLPPY FELAKRKGRV IGINFAFLFI DSLGAWLSII 180
  181 SVILGNMDIM GIILYSIVAG MELGIFASHF IWWCRFRFLA KGNTFDEESG QAQKEEPDEK 240
  241 IEQDISKSDR NVTNYNLDNC SIPDDASSFA DDFNIYDSTD GGTLSRAQTL HAVHGVVVRT 300
  301 DPDRYSRLSV

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.73
Transmembrane Helix	7	28	0.76
Cytoplasmic	29	37	0.82
Transmembrane Helix	38	59	0.89
Non-Cytoplasmic	60	67	0.79
Transmembrane Helix	68	87	0.90
Cytoplasmic	88	96	0.82
Transmembrane Helix	97	119	0.93
Non-Cytoplasmic	120	131	0.84
Transmembrane Helix	132	151	0.95
Cytoplasmic	152	160	0.86
Transmembrane Helix	161	184	0.90
Non-Cytoplasmic	185	191	0.81
Transmembrane Helix	192	213	0.96
Cytoplasmic	214	310	0.99