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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YDR089W
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFEDRILNK SIPEWKFYNI NYEKLKVAIK KVTAYDYDNP NDSGMEKLLN QCSVAFDQEF  60
   61 QNVNLFVSLK IKEISTRILS VESSIIDFSK GLNKTSRNRF NLRKLKIINA HVDDCNFELQ 120
  121 LLSRFLIIQR IALRKLFKKL LNEFPQDSEN PLTASEYVTS IRNSESLRNG HEGISFMKLD 180
  181 LDPYLLEVSL IVDVLHDLEN KLEDATEPAV EQRSLNRSDE SAHTSSSPEA NNSSLPASPR 240
  241 SIPLLSNKKT SKMIDSSLEF DTALIDKAEN LGRFLLSSED IEGLKFMLLN IGFRIIDDSI 300
  301 ISTSKEILDT TDNINSAGNK SIRSAKSFND LQHTLSLSKQ KNILPSAVQS NEKYVSISIL 360
  361 DTVGNEGSPL LLTDDNINQH PNMIVSSTAE DTCIVMCHVG GLRNHVVTND LLLRDVKNIL 420
  421 SAMRSGNDTK NISALINSLD PSPISKIALE WIQSHRLKTI EPKLDFKRTR FISADNGDIY 480
  481 LIALDESITI GNVSTLPFPI LEIKKLSRSS GLSQTAINED NKFKQLMKSV VTNEFQCSLI 540
  541 PPDLTTWKIC LELVHSNELQ NDLFQLLLRD QYKLNSDDSL SPDEFFQLGK DRLEEEFDLT 600
  601 GPINNSQGSV DSGRRVRIHK KSKQSDNETK KKPIRYWNEF DEQEEDNLDN AFYIDTNGSR 660
  661 STTDNEESLL LRNSPPDYGF ILFSRNFINR TYDFCEKLRN LIRHDKKTSP DLFQNSKHPH 720
  721 CSSTNYGSVA SFGSQSTSAS YDDVQRYLQY QQQDIEDSQS IYEYRHDEVV TFLYLSALLT 780
  781 SCIMASVCLG IVLSLFRGQS NNEIDLEIQN ILIAIIIISL LVSLILICAC LLLLFSRFTL 840
  841 APIWHYVGCF TMFFSVTGTV CYGMIEIFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle