YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TVP23_YEAST
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQARNFYNT ILKSSHPLLL SFHLAGKAVP IVFYIIGSMF LNFTPQFITV VLLLSFDFYL  60
   61 TKNITGRKLV QLRWWYDSTD VNKDSNFTFE SYKQYAPGPP INAIDSKLFW WSMYVTPVIW 120
  121 GVFAVLCLLR LKIFYLILVI VAMCLTAWNT YGFRCCDRWE PNSGQSDGQD TNNWFALPSV 180
  181 PGFENLSRLA NIQSFFQRQ

Type	Start	End	Confidence
Cytoplasmic	1	18	0.86
Transmembrane Helix	19	37	0.83
Non-Cytoplasmic	38	42	0.54
Transmembrane Helix	43	65	0.63
Cytoplasmic	66	107	0.68
Transmembrane Helix	108	128	0.89
Non-Cytoplasmic	129	132	0.55
Transmembrane Helix	133	153	0.86
Cytoplasmic	154	199	0.73