YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RCR2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILREQIDFL IHKRQDDNNN NGEAITDDDP FSSSSWRWGR WIFFIFFIVA LLILLFSTAK  60
   61 VNRRRRIMGQ APIRGTAWLT PPTYRQSERD YNGTQRCVED YVPEYTETAN ENDLGFYDER 120
  121 GEFHPNGKTE YLAPPPLSEE QASSTDKDLQ RPVAAVVRIP SESEFDFNLL RPTMNNFVNG 180
  181 QSNRNEQHSP TVESSSFDVN NAPARAKVSK

Type	Start	End	Confidence
Non-Cytoplasmic	1	39	0.83
Transmembrane Helix	40	59	0.94
Cytoplasmic	60	210	0.85