YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|111185614
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWISLILSL LALSSGAISQ AVVTQESALT TSPGETVTLT CRSSTGAVTI SNYANWVQEK  60
   61 PDHLFTGLIG GTYNRAPGVP ARFSGSLIGD KAALTITGAR TEDEAIYFCA LWYNNHLVFG 120
  121 GGTKLTVLGQ PKSSPSVTLF PPSSEELETN KATLVCTITD FYPGVVTVDW KVDGTPVTQG 180
  181 METTQPSKQS NNKYMASSYL TLTARAWERH SSYSCQVTHE GHTVEKSLSR AECS

Type	Start	End	Confidence
Signal Peptide	1	21	0.96
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	234	0.99