YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AIM6
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGLKGCLTI LIGYVIAVCA LFSSRGRNPS LTDWEKLKDQ KISDIDNFGL TGQHLLEFFQ  60
   61 ENLPFLSFSE EKYRHKHVSL YYDVFKEYIL RRASSKKCLP VDSAIAKLNK DVNPMPVHSH 120
  121 NDYWRKLPLF EGLAYGASST EADVWNIDEK ILAVGHNEAY LDPVELTLDK LYTGPLLEIL 180
  181 DEVNCQDSDA DRKNGVFFNS PETSLFFYID FKSDDNELTY KLLMEQYFKS LIDSGYLTYY 240
  241 DMKKDEIIWR PVTVILTGNY PTSLDILDNG NDNGYFESSQ RFAFLDAPLL SLEPKYSKLS 300
  301 VAATVSFSQL MKHCGSDHWK VSLRGRMDSN EISCAKSIID GAHALKLKTR IWGAPTWPAN 360
  361 LVETISRQII HDLGSDLLNL DNLFMASSLI

Type	Start	End	Confidence
Signal Peptide	1	26	0.83
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	390	0.99