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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BRE4
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRYERDRSP TPDPDIVKGS YSQTSLRSLH ELNYKNPAGI SGLSFAGSPQ QSVASLSQMR  60
   61 LENLVKDKHW EEVEDFGLEE LRDGFFDAAF TKPDSKARSP NSDIDDDNGA ARKKLQSGFT 120
  121 KLSEYVWTAI YRPIIHFPRD IRKNGVSIFK FFIAYFIAIV ICVIRPSGRW IGHEFRYFLP 180
  181 IAVLIHHPVR NIGVQLEMTI SSIIGASFGL GWSALAWYIS TATKPTANYQ GGILFQSLTM 240
  241 ALLFAIWLRS VYRRFFYFTT SFSISIIFTH TVRLASSKFD LKWQIFWDFG ISYLFGLLLS 300
  301 LLVCVCVSPH SGNAELMEHY NKCLQTTKTF LMALVDTELI KSKEQIYLAQ VKMVKTLNID 360
  361 LSQGFRDFVN QLTISRFDLQ SLKSLRNSLT AMETSLRVLP IAPKIFNDDE LKKMYEELEK 420
  421 YRSDSATLSK EASASPQSSG IPTRENTPSA FKPIGPGLLK NEIYINALKA SFSKSIFNLI 480
  481 LEMIFVLENL SRVLKKYESP NQKNNLDECV KILSHSHSKL KRKIYKLDVC YRDFVNSSFF 540
  541 SQELLNDEES VDIFLFLRYL RNSARQLVTV IHDCQVLGEN IHWRIALPSY PLSRALTRLP 600
  601 KQCVLDEGAG NVLHYFEAKR DVDEIFERVY NTYTSRHKYN KGEEEALRLD SQGGDEKSQN 660
  661 RKNHTISIRA IDHNDFNFHT TQNPWRFKLW KLSRILSGDE CKWTLKITFC MIFLCLPTWL 720
  721 PESYHWYQEF HCWWAPLTFY LLAHRRYSGN WALVMRRLIC GIVGIFWGWA ANQSRHFGSP 780
  781 YVVCTFAGLI VVPFSINFLV YRNTKSSFTA LMCFTIIALE PYSKPNRHYN LTTAGIWKST 840
  841 WVTGLALIIG ILVSIPINWI VWPFRARTEL RDSMSSLLAH LGQSYQTVAD RYLYRDADDA 900
  901 PTDLTFAFSH IREVRLTQSL EAIRELLKKA RHEPIIISNF NPEKYASLIN SCQFLLSKII 960
  961 EARISGAFFE IWDQDFDIET TRALLSLRRD SVSSVIFVFY ILSNCFRSKN KIPRYLPNPI1020
 1021 MSRKKLYHFI KKFSEMKDQS HSNLNSGGNS MEKNLFKKIY QQKASSSGQQ QLPLPSVANS1080
 1081 SEIDSEKMHW TEVHGIAFAR AFTDISEALF QVESCAKDIL GEENF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle