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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|168985196, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKAAAPSRG GGCGGRSRGL SSLFTVVPCL SCHTAAPGMS ASTSGSGPEP KPQPQPVPEP  60
   61 ERGPLSEQVS EAVSEAVPRS EPVSETTSEP EPGAGQPSEL LQGSRPGSES SSGVGAGPFT 120
  121 KAASEPLSRA VGSATFLRPE SGSLPALKPL PLLRPGQAKT PLGVPMSGTG TTSSAPLALL 180
  181 PLDSFEGWLL KWTNYLKGYQ RRWFVLGNGL LSYYRNQGEM AHTCRGTINL STAHIDTEDS 240
  241 CGILLTSGAR SYHLKASSEV DRQQWITALE LAKAKAVRVM NTHSDDSGDD DEATTPADKS 300
  301 ELHHTLKNLS LKLDDLSTCN DLIAKHGAAL QRSLTELDGL KIPSESGEKL KVVNERATLF 360
  361 RITSNAMINA CRDFLELAEI HSRKWQRALQ YEQEQRVHLE ETIEQLAKQH NSLERAFHSA 420
  421 PGRPANPSKS FIEGSLLTPK GEDSEEDEDT EYFDAMEDST SFITVITEAK EDRKAEGSTG 480
  481 TSSVDWSSAD NVLDGASLVP KGSSKVKRRV RIPNKPNYSL NLWSIMKNCI GRELSRIPMP 540
  541 VNFNEPLSML QRLTEDLEYH HLLDKAVHCT SSVEQMCLVA AFSVSSYSTT VHRIAKPFNP 600
  601 MLGETFELDR LDDMGLRSLC EQVSHHPPSA AHYVFSKHGW SLWQEITISS KFRGKYISIM 660
  661 PLGAIHLEFQ ASGNHYVWRK STSTVHNIIV GKLWIDQSGD IEIVNHKTND RCQLKFLPYS 720
  721 YFSKEAARKV TGVVSDSQGK AHYVLSGSWD EQMECSKVMH SSPSSPSSDG KQKTVYQTLS 780
  781 AKLLWKKYPL PENAENMYYF SELALTLNEH EEGVAPTDSR LRPDQRLMEK GRWDEANTEK 840
  841 QRLEEKQRLS RRRRLEACGP GSSCSSEEEK EADAYTPLWF EKRLDPLTGE MACVYKGGYW 900
  901 EAKEKQDWHM CPNIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle