YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIM22_YEAST
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYTGFGLEQ ISPAQKKPYN ELTPEEQGER GAEMIMNFMT SCPGKSVVSG VTGFALGGVL  60
   61 GLFMASMAYD TPLHTPTPAN TAATATAGNI GVGGISRTVQ QISDLPFRQQ MKLQFTDMGK 120
  121 KSYSSAKNFG YIGMIYAGVE CVIESLRAKN DIYNGVTAGF FTGAGLAYKA GPQAALMGGA 180
  181 GFAAFSAAID LYMKSEDGRP PQNDFKE

Type	Start	End	Confidence
Cytoplasmic	1	45	0.92
Transmembrane Helix	46	68	0.88
Non-Cytoplasmic	69	169	0.51
Transmembrane Helix	170	192	0.71
Cytoplasmic	193	207	0.76