YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108767389, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPVHFAFSS AFILGLTGLA FHRTHLLSAL LCLEGMMLSL FIALSLWTLQ LDSTNFSGAP  60
   61 MLLLAFSACE ASAGLALLVA TARTHGTDRL QSLNLLQC

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.63
Transmembrane Helix	5	22	0.68
Cytoplasmic	23	29	0.59
Transmembrane Helix	30	49	0.92
Non-Cytoplasmic	50	58	0.78
Transmembrane Helix	59	81	0.90
Cytoplasmic	82	98	0.89