YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDL183C
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRSIFIPPT SITATSRLFY GMRAYSTKLE KASLQKYLHD PVKVTVIPIT DKESFIYYKH  60
   61 TDNLFNSQSR ILKAEKWIVE KSAKLWRKLK KSPKSYNKKI VSMVQSLLNS TPWSENSLLT 120
  121 IPSESYILKR IKGEKDKTQE IRLTLKDYTV KAEQVDTQPL HVYYPPGISS PDECLRQMKK 180
  181 LYQEGLIYHK KWTLYCLLGL PLTIPLILIP LIPNVPGFYL SYRAYVNIKA YLGAKHLKSL 240
  241 LESSKQNLEF RELLGYTEVY KRGTSSRTQG NQKESKGAPE LLLNKKTLPL ILDFLEVHEL 300
  301 ESDLNKVILQ ESKSQEKNKI

Type	Start	End	Confidence
Cytoplasmic	1	191	0.60
Transmembrane Helix	192	212	0.59
Non-Cytoplasmic	213	320	0.94